PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P13490_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 436aa    MW: 47489.2 Da    PI: 6.9928
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P13490_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-09279327355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L+el+P +    sk   Ka +L + ++Y++sLq
  GSMUA_Achr3P13490_001 279 NSHSLAERVRREKISERMKYLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 327
                            58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.44E-10274331No hitNo description
SuperFamilySSF474594.84E-17274345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.491276326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-16277341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-6279327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-9282332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MDTNENNKFE LEKNHGNHLS NHSSGISDHW QFNTSTSSMA AGLMNLVTSS PYPSASEMEP  60
FTPGLWNHHA ANCVPIGEPV AVSSGGMLPS TVPGISSPRL PHFPAETALV ERAARFPCFS  120
GRNFSGMNLL FRPSESMVPY TNAMEDVTEI QLGKTEMNTT VQNGVLLPVD NASVNRGLIT  180
NQIDCESREA NFTKGGQEGN TDSSDAARNS SPKKRRTTQK EEVKRGPQSS SETTKETTEG  240
KQKVDQNSSE HSGKNGKYSS EAAKGDCVHV RARRGQATNS HSLAERVRRE KISERMKYLQ  300
ELVPGCSKVT GKAVMLDEII NYVQSLQSQV EFLSMKLAAV NPQPEFSTEG LLAKNLLHSH  360
GGCSSATGLP QEMIYPQVSL YPSQQGLMHS AISAIINPSE ALRRDMNAQL STTSVYKESS  420
LQVILLIRPL ILPDLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009392163.10.0PREDICTED: transcription factor bHLH76-like isoform X1
TrEMBLM0SEB60.0M0SEB6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P13490_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-63bHLH family protein